Difference between revisions of "Main Page"

Experimental data

Bioinformatic analysis

Human data analysis

• Differentially expressed genes
• Ontology analysis

CAGE-seq analysis

• GTRD database
• TSS and DEGs
• Key master regulators of co-expressed genes
• Gene set enrichment analysis (GSEA)
• Unique intergenic TSS
• Alternative usage of dominating TSS
• Enhancers
• Merging CAGE experiments
• Methods

Pathways & mathematical modelling

Linkage of metabolic pathways and gene expression

• MetGeneConjugation

Pathways and key proteins

• AMPK
• Ca-CaM-AMPK signaling models
• CaMKII
• CaMKKβ
• LKB1

Models

• Muscle models
• DataSets

Integrated modular models

• ...
• Model validation